rs31320429 SNP Detail

Summary

• ID
  rs31320429
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37760023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTC ACAGTGAGCA GGTGACTCAC
  R
  GAGGAGCAAA TGAATTGCTT AGGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45019130	mCV25306961	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss148945291	ENSMUSSNP126220	ENSEMBL	ENSEMBL_Sanger	f	SNP			A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31320429					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37760023 () rs orientation: forward

Symbol	Name	Function Class
Cpgi166	CpG island 166	658 bp distal
Cracdl	capping protein inhibiting regulator of actin like	1118 bp upstream
Rr29331	regulatory region 29331	222 bp distal
Tssr11314	transcription start site region 11314	1043 bp upstream