rs31325932 SNP Detail

Summary

• ID
  rs31325932
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:96488001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTAAGTGAG TCAAACAGGC AGAGTTATAA
  GAGAAGACAT CTTAAGTAGA AGATCACTCA AGACCACTGG GTAACATATC AAGTTAAGAA
  AAGACAAGCA ACAGAGGACC TTTGACTATA ATTATGTGGT CTCTCGGACC GCTCCGCTAA
  Y
  ATGTCACTGC AGCTTCTTCC AGGCGCGTTT CAGTTCATCA ACAAGGGACA TTCCAGAGTG
  GCAGGATCCA GAAGTACTCC GGATGTGCAC AGTTCTGGAT GTGCACAGCT GACCTAAGAT
  CATATCAGGA ATGATACATG GTTAGGGAGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45019911	mCV23788303	ABI	CRAMUS_MOUSE	f	SNP	C					C	T
ss51309944	NES14502631	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C			C	T		T	T	C	T		T
ss144986067	ENSMUSSNP1522922	ENSEMBL	ENSEMBL_Sanger	f	SNP	C						T
ss319853067	CHEV_1_98456853	CHEVERUD	SCREENING_POP	f	SNP										C					T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31325932					SNP	C	C	C	C	C	C	T	C	T	C	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51309944	NES14502631	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:96488001 () rs orientation: forward

Symbol	Name	Function Class
Gm70795	predicted gene, 70795	within coordinates