rs31327061 SNP Detail

Summary

• ID
  rs31327061
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191177532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCTGAGAGTC CTCTCCCCTC CGAGGAGCAT GCCTATTCTT GACAGCCCAC CCTTTCAACG
  GCACGTTTAT TCCTCTTGAT TCATTTTGTG CTCAGAAATG TCATTGCTGT GTGCGGAATC
  ACGTGGGAGT CACCTGTTAG GGAGACTAGA GGCAAAGACA ATCCAGTGCA GACTCCTATT
  TAGACAATGC CAGATGTCCA TCTTGTCTCA GAGACGTCTG GGGGAGCCCA GGAAGGAAGA
  CAGACTCTGT GGTTTATGTA AACTGTCAGC TTGGCAAGAC CTAGAGTCAC CTACTTATTT
  R
  TTTATTTATT TATCTATCTA TCTATTTATT TATTTATTTA GAGACAGGGT TTCTCTGTGT
  AGCCCCGACT GCCCTGAAAT TGGCTATGTA CACCAATTTG TCAGACTCAG AGACATCTGC
  CTGCCTCTGC CTTTGGCGCC CTGGGATTAA AGCCATGTGC CACCATGCCC AGCAATCTTA
  GTTACATCTG CTGTTGCTGT GATGAAACCT CAGGACCAAA GACAACTTAC GCAAGAGAGA
  GTTGATTTTG GCTTTCGGTT CCAGAGGGCA AGAGTCCGTC ACGTCACGGT GGAAAGCCAT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45020009	mCV23930630	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31327061					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191177532 () rs orientation: forward

Symbol	Name	Function Class
Gm32200	predicted gene, 32200	within coordinates
Rr372646	regulatory region 372646	302 bp upstream
Tssr15793	transcription start site region 15793	468 bp downstream