rs31332919 SNP Detail

Summary

• ID
  rs31332919
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:190802836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC TGCAGAGCAG AGAAAGCGTT
  R
  TCTGCCGTTG ACTGTGTCAT GCCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45020466	mCV23579852	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss146501477	ENSMUSSNP6684198	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31332919					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190802836 () rs orientation: forward

Symbol	Name	Function Class
Nsl1	NSL1, MIS12 kinetochore complex component	Intron
Rr426039	regulatory region 426039	1987 bp distal
Rr426040	regulatory region 426040	917 bp proximal
Rr426041	regulatory region 426041	1729 bp proximal
Tssr10723	transcription start site region 10723	1440 bp downstream