rs31335143 SNP Detail

Summary

• ID
  rs31335143
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185020074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTGTTAA TGAAGATGAA
  TCAAGGTGAC AGCCCTTTGA ACAGTGCACA GAAATCCTGT GATAAAAAGT CTGCCCAGCC
  CTTTATAAGA ATGGCTAATG GTATTTTAAT TAGGATATGC ATAAAAGGAA ATTTTAGAAT
  TTACACAGGA TGGGTCAGCG GGGCTGGGCC ACATTAGGCA CTGTATCAGA ACACGAGGGG
  R
  GAAAGACTCT GTGACAGTCA CTCATGGGTG AGAAGGAACT GTCCCGGCCT CAGCTTCCGT
  TCCCAGAGCC CTGAGACCTG GCTCAGCCAG TCTTGAGGTA GCCTAGTCCC ATGGAAAGCT
  GGGGGTGACA TCAACTATTC AGTCCCTGCT CACTCTTCTC ACCTTCTAGA TTGATGACGA
  ATGTCCCCGT GAGCTCAATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45021324	mCV24554590	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146426569	ENSMUSSNP950119	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31335143					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185020074 () rs orientation: forward

Symbol	Name	Function Class
Iars2	isoleucine-tRNA synthetase 2, mitochondrial	within coordinates
Rab3gap2	RAB3 GTPase activating protein subunit 2	1118 bp downstream