rs31335440 SNP Detail

Summary

• ID
  rs31335440
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:106890010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG TTGCAGCTGC TTTGGAGCCA
  Y
  CCACGCTGCA CTAAATAGCA CTTTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45523902	mCV22905136	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss135580893	ENSMUSSNP3082777	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31335440					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:106890010 () rs orientation: forward

Symbol	Name	Function Class
Gm27008	predicted gene, 27008	1094 bp upstream
Rr582880	regulatory region 582880	1285 bp distal
Rr582881	regulatory region 582881	974 bp distal