rs31335467 SNP Detail

Summary

• ID
  rs31335467
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:131424821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGCAAAGC AAGGCATCTC
  ATTTGGGCAT GGTTTGCGTA AGTCCAAAGT GCAGTAGTGT CTCCCAAGAT ATTTCAGCAT
  TGTATTGCTC AGTGTGCTGT TGCAATTGGG TGCTTCTCCA TTGGAGGTGT AAAGATGTAG
  ATGAAAAGAC TTCCTTCTGC TCTCTATGTG ACAACCTGAG ATGCTGGATA GAACGGGCCC
  Y
  ACGTTTCCCC TTGAATGAGT ACCTGCTCCA TCTAGGGTTG TCAGCAAGGG GTCAGCATGG
  AGGTCACACC CTAATGAAGA GCTTTTGGAT CAATAGAGAG AAAAAAAGGA TCATTGGTTA
  ACCATCACAC CAATAAGTAT CGATTCAACT GCTTGTTAAG AGGAGGTCAG CACTGGGCCC
  TTTGAGTTTG GATCTTGCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46022488	mCV23076871	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss145936152	ENSMUSSNP6917030	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31335467					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:131424821 () rs orientation: forward

Symbol	Name	Function Class
Gm34645	predicted gene, 34645	1679 bp downstream
Gm44546	predicted gene 44546	921 bp upstream