rs31336881 SNP Detail

Summary

• ID
  rs31336881
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121580414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGTAGAAAG CCTACCTCAG CCAGCTGGAA AGGGCAGAAA GTAAGCAGTG TAGGTTTTGT
  GGGTCCAAGT TCTGGTTGCA ACTACTCAAT GCTTTCACCA ATAGAGTATA AGTAACCAAG
  ACTGCCTGAC TAGACTCTAA TAAAGCTTTG CCTTTTAAAA AAATATATAT GGTGTGTCCA
  CACCTTTAAT CCCAGCCCTC AGAGGCAGGC AGATTCTGTG AGTTTGAGTC CAGGCTGGTC
  TACACATTGA GATTCAGGTC ACCTAAGGCT ACATACTGAG GCCCTATCTA AAAAGAAAAA
  R
  AAAAAAAAAT TTAAGCTGAG TAATGAGACC TAAGCAGTAG TCCTGGCTGG CCAATCCTGA
  GACTGTGGCA CATGAGAGAA GTATCTAAAT CAGTCTGCAA AAGCCTCAGG TCCTTTGACA
  CAGTTCAACA AAAGCAGTTC CTCTTTTATC TGCTTTTTAT CTGGTTTATG CATTTACCTG
  CTTTTCAAAT GCATACTAAG AATCTAAAAT AAGGGTTCCA CTCACTACTT ATTTAAGGGT
  TTGAAAGTTG GGCTGGAGCG ATGGCTCAGC CATAAAAGGC ACTTGCTGCT CTTGCAGGGG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45523352	mCV24754102	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss135729195	ENSMUSSNP6370521	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31336881					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121580414 () rs orientation: forward

Symbol	Name	Function Class
4633401B06Rik	RIKEN cDNA 4633401B06 gene	735 bp downstream
Abcd3	ATP-binding cassette, sub-family D member 3	within coordinates
Tssr35428	transcription start site region 35428	1045 bp downstream