rs31337112 SNP Detail

Summary

• ID
  rs31337112
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126290349 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTCCCAA CTGAGGCTCC
  AAGTCACAGG TGCTACCCTC TGAGCCTCTA ATTATTATCT TGTTTGGTTT CAGTTGTCAA
  CTTCACCCAG CCCTGCATTT TCGGAGGGCT CCTCAACCGG GAAACTGTCT CAGCCAGACT
  TGCCTGTGGG CACATCTGTG CGGGCATTTT CTTTATTGCT GATTGATGTG AGAAGGCCCA
  S
  CCCACTGTGG ACAGTGCCAC CCCTAGGCAG GGGGTTCTGG GTCATATAAG TGTTGATTGA
  ATGAAGCACC AGCCAGAGAG ATGGCGCCAA TAGGCAACCC CCTGCATGGT TTCTAGGTTC
  CTGCTTTGAG TTCCCACCCA ACCTTCCCTC GCTGATGGAC TGGAAGTGTA ACATGGGACA
  AGCCCCCTCC TCCCCCAAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46022124	mCV23683961	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	G
ss145875705	ENSMUSSNP6070679	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31337112					SNP	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126290349 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19704	CpG island 19704	1144 bp proximal
Rr655562	regulatory region 655562	1778 bp distal
Rr655563	regulatory region 655563	109 bp distal
Rr655564	regulatory region 655564	1961 bp proximal
Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	within coordinates