rs31337982 SNP Detail

Summary

• ID
  rs31337982
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28169176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA CTCAGGAGGC AGAGGCAGGC
  K
  GATTTCTGAG TTTGAGGCCA GCCTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss46022024	mCV22858978	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
ss148633054	ENSMUSSNP3761962	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31337982					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28169176 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18706	CpG island 18706	1794 bp distal
Lrfn1	leucine rich repeat and fibronectin type III domain containing 1	1509 bp downstream
Tssr65486	transcription start site region 65486	1849 bp downstream