rs31343107 SNP Detail

Summary

• ID
  rs31343107
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121506986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGGAACTC GAGGTACCCT GCAGAACCTT CTCCTGTCAT
  GATGCTTTCC GGGAGCTTAG GCATAGATGC TATCAGGCTG GGTCGGTACA AGTGCGTATG
  Y
  TCTGCGGCCA GACTGTAGTG TGAGCCACAG CTTTGTCCTC TCCTGCATCT GAGCCCGAGC
  AGTGGTATCA GTCTTAGCAA GTCATAGATT TCTCAAGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45524671	mCV23475979	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss135727293	ENSMUSSNP6922676	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss320905054	CHEV_3_121416255	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31343107					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121506986 () rs orientation: forward

Symbol	Name	Function Class
Gm43607	predicted gene 43607	891 bp upstream
Rr584146	regulatory region 584146	within coordinates