rs31351250 SNP Detail

Summary

• ID
  rs31351250
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:149440494 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CACTG AGGAGACTGG GAAGCCGTTA
  R
  CGGGGAGGGG GTGGGGCGGG CTGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss46516230	mCV23372007	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31351250					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:149440494 () rs orientation: reverse

Symbol	Name	Function Class
Rr694335	regulatory region 694335	1080 bp distal
Rr694336	regulatory region 694336	within coordinates
Tro	trophinin	within coordinates
Tssr164371	transcription start site region 164371	1902 bp upstream
Tssr164372	transcription start site region 164372	365 bp upstream
Tssr164373	transcription start site region 164373	121 bp upstream
Tssr164374	transcription start site region 164374	91 bp upstream