rs31352371 SNP Detail

Summary

• ID
  rs31352371
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:98381672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAG GTGCGATTGT AGCCATGTGC
  Y
  GCCAGGCTTC GTTCACAGCC TTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46516246	mCV24848730	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss134253878	ENSMUSSNP3134058	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss325906643	CHEV_X_96533405	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31352371					SNP	T	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:98381672 () rs orientation: forward

Symbol	Name	Function Class
Rr5084	regulatory region 5084	1329 bp proximal
Rr6222	regulatory region 6222	272 bp distal
Rr10213	regulatory region 10213	within coordinates