rs31360826 SNP Detail

Summary

• ID
  rs31360826
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:59653965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTACG ATTCTCTTCA TTGCCTTCTC
  W
  CACATTTTTC CTCACTGCTA ACATC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46518589	mCV22787082	ABI	CRAMUS_MOUSE	f	SNP		T	T				A
ss50896514	NES13490381	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T		T	T	T	T		A	T	T	A		T
ss325876301	CHEV_19_59741436	CHEVERUD	SCREENING_POP	f	SNP												T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31360826					SNP	T	T	T	T	T	T	A	T	T	T	T	T	A	T	T	A	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50896514	NES13490381	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:59653965 () rs orientation: forward

Symbol	Name	Function Class
D19Mit76	DNA segment, Chr 19, Massachusetts Institute of Technology 76	308 bp distal
D19Mit92	DNA segment, Chr 19, Massachusetts Institute of Technology 92	308 bp distal
Gm19956	predicted gene, 19956	within coordinates