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rs31363514 SNP Detail
Summary
  • ID
    rs31363514
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr7:144416325 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          GGGGC GGGTGGGGCG GGGAGAGGGG
    K
    ACTCCAGCAG GAGATATTAA GTTGA                                      
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss46024381 mCV24316507 ABI CRAMUS_MOUSE f SNP G G T G
ss145992506 ENSMUSSNP1751461 ENSEMBL ENSEMBL_Sanger f SNP G G G
ss322484932 CHEV_7_152048493 CHEVERUD SCREENING_POP f SNP G T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs31363514 SNP G G T G G T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:144416325 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi20003 CpG island 20003 189 bp distal
Cpgi20004 CpG island 20004 53 bp proximal
Fgf4 fibroblast growth factor 4 within coordinates
Rr366757 regulatory region 366757 1199 bp downstream
Rr366758 regulatory region 366758 872 bp upstream
Tssr70358 transcription start site region 70358 1193 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory