rs31365569 SNP Detail

Summary

• ID
  rs31365569
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:161560156 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAAAGGAC ATTTAAATTT
  AAGACTAGTA AGTTGTCAGT GAAGAGAAAC GGTTCAACTG ATAGAAGCAA GCTTGCCCCC
  CCCCCCCCCA AGGAGAGAAA AACACGAAGT TATTTATTTG TAAAGCTGTT TACCATACCA
  TTTCACTTAT GTGAAATTGT TGCTTTTAGT TTTTTCTGTA GCCAAGGCCT CACTCACAGA
  S
  ATATGTGTGC TCTGAGATAT GTGTGACACC CCCCCCCCAT CTTGGTTTGT TTATCTCAGT
  TTTTTTAAAA CTGATAAAGC TGTACTACAA GGTTTGTTAG GCATAGTGCC TTGTAGAAAA
  CAAGATCCCA CCCTTTTACA TTTTTGGGGA AAGTTTCATT GGCCTATGCT GCAAGTCTGG
  ACCTTAAAGT ATTTATTTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47044690	NES11158484	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31365569					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47044690	NES11158484	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:161560156 () rs orientation: forward

Symbol	Name	Function Class
Rbbp7	retinoblastoma binding protein 7, chromatin remodeling factor	within coordinates
Txlng	taxilin gamma	1759 bp downstream