rs31367280 SNP Detail

Summary

• ID
  rs31367280
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:80515756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTAGAGGA CTACTCATGT GATCCATTGT GAAGATAATG
  AATGTACCTC TCCAGAATCC TACACCAATT ATGGATTCTG CAGGAAAGTG TAGAATACCA
  K
  GCATGGTATC TGTGATTTAC TCTTGAATGC CTCATTCTTG TGCAGACTCA TGGTAGGTAC
  TCCAGATGTT GTGTGATCAT TGCATTGGCT ATACCATTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss46519420	mCV25212230	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss134228558	ENSMUSSNP370817	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325901778	CHEV_X_78717489	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31367280					SNP	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:80515756 () rs orientation: forward

Symbol	Name	Function Class
Rr7859	regulatory region 7859	465 bp proximal