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rs31368463 SNP Detail
Summary
  • ID
    rs31368463
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr1:189077751 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          GCTCT GGGAGAGCTG ACAACGGTCC
    Y
    ATAATACCCA GGACTAGGGA GGCGG                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45024400 mCV24984158 ABI CRAMUS_MOUSE f SNP C C T T
ss146485654 ENSMUSSNP5632239 ENSEMBL ENSEMBL_Sanger f SNP C C T
ss320190733 CHEV_1_191169433 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs31368463 SNP C C T T C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:189077751 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
A430027H14Rik RIKEN cDNA A430027H14 gene 662 bp downstream
Cpgi1195 CpG island 1195 1129 bp distal
Kcnk2 potassium channel, subfamily K, member 2 Intron
Noncoding-Transcript-Variant
Rr425783 regulatory region 425783 1858 bp distal
Rr425784 regulatory region 425784 1560 bp distal
Rr425785 regulatory region 425785 1578 bp distal
Rr425786 regulatory region 425786 1373 bp distal
Rr425787 regulatory region 425787 1025 bp distal
Tssr15713 transcription start site region 15713 1805 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory