rs31368826 SNP Detail

Summary

• ID
  rs31368826
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104470993 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTGGATGAC TGACAGCCCG AGGAAGGCTT GGGATGCTCT GCCATTGTCC TCGCTGAGGC
  ACCTGTCCCC ACCACCTCTG CCACTGTCAC ATGAAAACAC CTAAAGCACC ATTCAATCCT
  GTCACACCTC ATCTAAAGCA TTGGGCCAGG GAGACGGCTC AGCGGGTGCT TGCTACCAGG
  CCTAAGGACT CAGTCCAGTC CTACCTTCAC AAACATAGTT TTACGTGTAC ACACACGCAC
  CCCTGTAAAA TATCCATAAA TATGCATAAC AGCCTCCCCA GCCCCTCCCA TCCCTCCACC
  M
  CCCCACCCAG GTCTCAGCTT GTGTCCCCTA GCTCCCAATG AGAGTCAGAC TGCTATCATT
  GTCATTGTCC CCAAGCTCAT GCTGAACCCT GACTCCTCCA TAGATATTTC CTCAATTCTC
  TCAGTAGTCT TTCTCACAAA TCTTGGGGTT ATGGTTCTTT ATAAATTTAT CTTAAACCCT
  GAAGAGTGCA TGCAGCTACA GGAATGGTGG TACAGAGTTC AGGAGGGGGA GGCAGGGGCT
  CAGTCAGGGG CTAGCTTGGG TTATATAGTG AGTGCCAGGC TAACATGGGC TACATATGAA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45526256	mCV23109997	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31368826					SNP	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104470993 () rs orientation: forward

Symbol	Name	Function Class
Rr367516	regulatory region 367516	1826 bp upstream
Rr582541	regulatory region 582541	1782 bp distal
Rr582542	regulatory region 582542	1725 bp proximal