rs31369183 SNP Detail

Summary

• ID
  rs31369183
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79894375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAG GTTCCGTTCC CATCAGTCCC
  M
  AAGGTGGCTC ACAGCCATGT ATAAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46025115	mCV23905093	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss145139828	ENSMUSSNP6212696	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
ss322280545	CHEV_7_87389513	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31369183					SNP	C	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79894375 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19326	CpG island 19326	1487 bp proximal
Gm73873	predicted gene, 73873	116 bp downstream
Rr158192	regulatory region 158192	1375 bp distal
Rr165873	regulatory region 165873	226 bp proximal
Rr168083	regulatory region 168083	1225 bp proximal
Rr400401	regulatory region 400401	1568 bp upstream
Tssr2310	transcription start site region 2310	1732 bp upstream
Tssr67422	transcription start site region 67422	1742 bp upstream
Tssr67423	transcription start site region 67423	1748 bp upstream
Tssr67424	transcription start site region 67424	1803 bp upstream
Tssr67425	transcription start site region 67425	1820 bp upstream
Tssr67426	transcription start site region 67426	1879 bp upstream
Tssr67427	transcription start site region 67427	1902 bp upstream
Ttll13	tubulin tyrosine ligase-like family, member 13	1749 bp upstream