rs31370601 SNP Detail

Summary

• ID
  rs31370601
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27252729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGA GTGTCTGACA GTTGGCGCGA
  Y
  CCGGAGGGCG GGCGGGCGCC TCGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46025223	mCV22847361	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss148624760	ENSMUSSNP35440	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31370601					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27252729 () rs orientation: forward

Symbol	Name	Function Class
2310022A10Rik	RIKEN cDNA 2310022A10 gene	within coordinates
Cpgi18668	CpG island 18668	within coordinates
Gm74065	predicted gene, 74065	1942 bp downstream
Pld3	phospholipase D family member 3	86 bp upstream
Rr167329	regulatory region 167329	within coordinates
Tssr65296	transcription start site region 65296	2 bp downstream
Tssr71425	transcription start site region 71425	234 bp upstream
Tssr71426	transcription start site region 71426	189 bp upstream
Tssr71427	transcription start site region 71427	55 bp upstream