rs31373085 SNP Detail

Summary

• ID
  rs31373085
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:63568039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCTTGTGC TGAGGACCAA TGCTATCCTT GGGGGCTGGT
  AACCAGGAAA AGCATACACA CTCATACTCT ACTAAACTGT ATGAAAACAC AGAGGTGGCA
  M
  CACCCCACAA CACCCATGCT GCACAGGGTT CCAGATGCCT GGAGGGAGCA GAGAGATTTG
  AGTCCTTCAA GATACCCTTG GGTGGTGATC ACAAATGCC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46025430	mCV25343616	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	C
ss144834839	ENSMUSSNP1271612	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31373085					SNP	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:63568039 () rs orientation: forward

Symbol	Name	Function Class
E030018B13Rik	RIKEN cDNA E030018B13 gene	Intron
Gm53391	predicted gene, 53391	within coordinates
Klf13	Kruppel-like transcription factor 13	Intron
Rr647715	regulatory region 647715	1573 bp distal
Rr647716	regulatory region 647716	29 bp distal
Tssr66988	transcription start site region 66988	1375 bp downstream
Tssr66989	transcription start site region 66989	1043 bp downstream
Tssr72768	transcription start site region 72768	680 bp downstream