rs31376491 SNP Detail

Summary

• ID
  rs31376491
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135672944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTC CTTTTCTGCA TGAGTCAGTC
  Y
  AGTCCTGGGA GGCCCCCAGC TGCAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45024841	mCV23240582	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145544719	ENSMUSSNP455909	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss319992918	CHEV_1_137641783	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31376491					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135672944 () rs orientation: forward

Symbol	Name	Function Class
Csrp1	cysteine and glycine-rich protein 1	within coordinates
Rr419261	regulatory region 419261	920 bp distal
Rr419262	regulatory region 419262	1017 bp proximal
Tssr222	transcription start site region 222	1564 bp upstream