rs31376969 SNP Detail

Summary

• ID
  rs31376969
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:123601890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATGCCTA CAACTTGCAG
  GAGGGGCAAG AATTAAACAC TGCCTTGGAC TTGAGATTGT ATCAGGCTTG TCTCTTATGA
  AAGGCATGCC AGGCTGGCCT ACCTACAGAT ACTTGCTCCA GGCCATAGGT ATTTTATTGA
  GCTAGAAGGC TGACTGCATC CATCAAAGTT GTAATCTTCA GCTGTACAGC TGTAAGCAAG
  R
  TTCTGTCACT TAGGAAACAG AAAGCTAATC CCTGAAGCTC AATCCCAAGA GTATTGTTCA
  ATGGCATAGG CAACCCAAAG TCCCTATACT GAAGTCAAGT AGCAATAGAA CCTCCAGATC
  CAACACTTCA TCAGATTGTG ACCTGTATGC TTGTAAACCT GCAAAATTTA CAGCCTATAG
  TGAACTTGGG GTACACCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45526825	mCV23882615	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss135773737	ENSMUSSNP956652	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31376969					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:123601890 () rs orientation: forward

Symbol	Name	Function Class
Rr584566	regulatory region 584566	1973 bp distal
Rr584567	regulatory region 584567	1522 bp proximal