rs31377296 SNP Detail

Summary

• ID
  rs31377296
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143565392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTTTCTC TTTTCATGCT
  GACCTTTCTC ACAGGTGGGT TAGTCTGCTC CTACAAAATC TGGCACTGGA ACCATTTATG
  CAACCAAATG GCACTTTAGC AGAACAGTGT GTAGTGCATA GGTTGAGACA CAGTGGTGAA
  GAAGGAAATA TAACAATCCC CAATTCTGAT AATTCGCTTA CCATGAGATA TAGAACAGAG
  R
  ATGTTTTTTG CTGTCTCTAT ACTTATTTCC TTATCTTTAA AGTGAGAACA GAGAATTATA
  GAAAGGTGAC TGCTGTTTAG TTTGAAGAAA AGAAAGAAAA AAGAATGAGA TTCTTATCTT
  CACCAGGATT CCTCTAGTCA ACTGTGCTAT ATCTCATTCT GTCCTTTATT CTTTATTATT
  AATATTTAAA CTTAATTAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45526920	mCV23568967	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss136026649	ENSMUSSNP4280189	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31377296					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143565392 () rs orientation: forward

Symbol	Name	Function Class
Gm33925	predicted gene, 33925	within coordinates
Gm40160	predicted gene, 40160	1804 bp downstream