rs31378619 SNP Detail

Summary

• ID
  rs31378619
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:8359896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggagtcttg aaaaaggggg tcaatacagg
  cacctgtagt gcctttgcat cagaggaggg caggaggttt aacacatagt gatttgatga
  ttgtgatgta atagacacac taagatgggg tttttgagga gggccctaca aggcaaagtg
  S
  gggaaggagg tcaaacaggg aaatgtcctg tgctttcctc gtaggtatgg ttccatggag
  cttgtgaagg aaaatgttaa tggaacagct gctaataatg gtcgggagag agaagcacag
  aaaaagcatt aggaggagtt ggggtgggtt                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45024560	mCV24663482	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C	G
ss319624972	CHEV_1_8279753	CHEVERUD	SCREENING_POP	f	SNP						G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31378619					SNP	G	G	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:8359896 () rs orientation: forward

Symbol	Name	Function Class
Gm70752	predicted gene, 70752	within coordinates
Rr407573	regulatory region 407573	1915 bp distal