rs31379752 SNP Detail

Summary

• ID
  rs31379752
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:137379798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGTGCAAT GTAAGAAATT GACTCAATGA TTCACATTCT
  CAGGAGGGCC CAGGGAAAAT CCTGCATGGC TTTTGCCAGC TGTTTGTGGC TTCTGTCATG
  R
  CAGGGGCAGG TTCACCCCAT CACTGCCCGT TATCAAATGG CTTTCTTCCC TGTATCAATG
  TTCACATTTC CCTCCCTTTA GGGTCTGTTC TATTCCAGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45025897	mCV22938997	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss145569191	ENSMUSSNP4103453	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31379752					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:137379798 () rs orientation: forward

Symbol	Name	Function Class
Gm70880	predicted gene, 70880	within coordinates
Rr419604	regulatory region 419604	1433 bp proximal