rs31380155 SNP Detail

Summary

• ID
  rs31380155
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:136537587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGTTTTCC TATAACACAT TCTCCTGCCT CCTGCTGCTC
  TTCCCTGGAG TTTGCTGCTG CTGTTGGGTG AATACAGATG TGGCTGGTGA GCCATCAGGG
  Y
  TGGCCAGGGG CCGGCAGATA ATCACTCTTT GCCACTGTAC ATTTCTGGAT TGAAGGCTGT
  TTCTGGGGGC TGATTTTTTT CTCTCATCTC TCCAGTGAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45527158	mCV24276045	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss320974679	CHEV_3_136494790	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs31380155					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136537587 () rs orientation: forward

Symbol	Name	Function Class
Gm66095	predicted gene, 66095	within coordinates
Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform	Intron
Rr585881	regulatory region 585881	661 bp distal