rs31380582 SNP Detail

Summary

• ID
  rs31380582
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185320544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGAACTG TTCATGAAAG
  CTGGCAGCGC TTCACTTGAA GACTTTGTGT TTATCTTGAA GTAATTTATG AGTGACTGTG
  GAGTTTGCAT TGTTAGAAAA ATTGATTGTT GATAGCGTCC CAGCCTACTT GATAAATGCT
  TCTTTGCTTC AGTCTGTTGG AATGTGACGT CAATGCTGTG TGACTGAAGG GCCGGGCTAC
  R
  GGCAAGCTGG TAGAAACTGC AGTAGTAGAG TTATTTCTTT AGAAGCTTCC ACAGAGTTCC
  TTCCCACAGG CCAAGCATGT GTCAGAGGCC AGAGATGTGA ATCCTCATAA GCTCCACAGA
  TGTTTCAGAC CTGTTTGATG TAGAGCATTG TGCTGGAATC CAGCACAATG AGATGCAATC
  CATGTCCCCA GGAAATCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45025908	mCV24549038	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss146437011	ENSMUSSNP818397	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss320177566	CHEV_1_187412226	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31380582					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185320544 () rs orientation: forward

Symbol	Name	Function Class
Rr425415	regulatory region 425415	within coordinates