rs31383251 SNP Detail

Summary

• ID
  rs31383251
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:122296167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGTC GTGAACCTCA CGTTAGGCTT
  Y
  TCCTCAGGTC ACAGTCTCAC AGAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39284638	mCV25174056	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147010252	ENSMUSSNP5910407	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss324857818	CHEV_14_122457977	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31383251					SNP	T	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:122296167 () rs orientation: forward

Symbol	Name	Function Class
Gm63354	predicted gene, 63354	691 bp upstream
Gm63496	predicted gene, 63496	1478 bp downstream
Rr404309	regulatory region 404309	1959 bp upstream
Rr498317	regulatory region 498317	702 bp distal
Rr498318	regulatory region 498318	381 bp distal
Rr498319	regulatory region 498319	1887 bp proximal
Tssr127312	transcription start site region 127312	389 bp downstream
Tssr130315	transcription start site region 130315	672 bp upstream