rs31385494 SNP Detail

Summary

• ID
  rs31385494
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55205365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGG CACCATCAAG CACCCAAGGC
  Y
  CAGAGGCAAC CCCTGTCCTC CAGGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39284461	mCV23144803	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss139574333	ENSMUSSNP562780	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss324641225	CHEV_14_55586745	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31385494					SNP	T	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55205365 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	850 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	981 bp upstream
Rr407057	regulatory region 407057	125 bp distal
Rr492378	regulatory region 492378	1314 bp distal
Rr492379	regulatory region 492379	777 bp distal
Rr492380	regulatory region 492380	327 bp proximal
Rr492381	regulatory region 492381	1753 bp proximal
Tssr4419	transcription start site region 4419	1606 bp upstream
Tssr4420	transcription start site region 4420	1493 bp upstream
Tssr4421	transcription start site region 4421	1487 bp upstream
Tssr4422	transcription start site region 4422	1435 bp upstream
Tssr4423	transcription start site region 4423	1409 bp upstream
Tssr4424	transcription start site region 4424	1371 bp upstream
Tssr4425	transcription start site region 4425	1258 bp upstream
Tssr125718	transcription start site region 125718	764 bp upstream
Tssr125719	transcription start site region 125719	843 bp upstream
Tssr125720	transcription start site region 125720	873 bp upstream
Tssr125721	transcription start site region 125721	893 bp upstream
Tssr125722	transcription start site region 125722	1318 bp upstream
Tssr125723	transcription start site region 125723	1387 bp upstream
Tssr125724	transcription start site region 125724	1399 bp upstream
Tssr128741	transcription start site region 128741	1941 bp upstream
Tssr128742	transcription start site region 128742	1323 bp upstream
Tssr128743	transcription start site region 128743	1300 bp upstream
Tssr128744	transcription start site region 128744	971 bp upstream
Tssr128745	transcription start site region 128745	686 bp upstream
Tssr128746	transcription start site region 128746	44 bp downstream
Tssr128747	transcription start site region 128747	73 bp downstream
Tssr128748	transcription start site region 128748	92 bp downstream
Tssr128749	transcription start site region 128749	155 bp downstream
Tssr128750	transcription start site region 128750	174 bp downstream
Tssr128751	transcription start site region 128751	191 bp downstream
Tssr128752	transcription start site region 128752	244 bp downstream
Tssr128753	transcription start site region 128753	433 bp downstream
Tssr128754	transcription start site region 128754	512 bp downstream