rs31385589 SNP Detail

Summary

• ID
  rs31385589
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45024620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCTCATGAC CACACAGAGC AGCTCAGGGG TAGGGACAGG CCTCAACGGT TTGTAATTTT
  TTCAAGGATG TGAATACAGT GGCTATTTCT CACTAATAAG AATGATAAGT GGATTGGAGA
  GATGACTCGG CTGTTAAAAG AGCACTGACT GCTCTTGCAG AGGTCCTGAG TTCAATTCCC
  AGCAACCACA TGGTGGCTCA CAACCACCTG TAATGGGATC CTATACCCTC TTCTGGAATG
  TCTGAAGAGC ACAGGGTACT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT ATATATATAT
  M
  TATATATATA TATATATATA TATATAGTGA GAGAGAGAGA AAAGTACACA TCTTGAAGGC
  AAACAGTATG ATGGTTCTAA TTGGGAGGGG AAGAAACACA GGATTGATAT TCCCTGAAGA
  AGGGTCACTA GATCTTCAAC TGAGTCACTA CCTGCACAAA ATCAAGGCCA GCCTGTCTAA
  ATGGGTTCCA GGACATCGAG GGCCACAGAG AGAAACTGTC ACCAAAACCC AAAACAAACC
  AAAACAATCA AATAAACAAA AACAGCTCCC CCATCCCCCC AAAAGAAAGA AATCCCAATG
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss46027532	mCV22694748	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs31385589					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45024620 () rs orientation: forward

Symbol	Name	Function Class
Snrnp70	small nuclear ribonucleoprotein 70 (U1)	1257 bp downstream
Tssr66520	transcription start site region 66520	1974 bp upstream