rs31386284 SNP Detail

Summary

• ID
  rs31386284
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12569721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC TGCTTGTAGA GGACAGAGAG
  Y
  ACCTTTCCGG ATCGCTACCC TTCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46027585	mCV23046840	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss148340692	ENSMUSSNP2756728	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss322106504	CHEV_7_13421143	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31386284					SNP	C	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12569721 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18318	CpG island 18318	375 bp distal
Rr642383	regulatory region 642383	1023 bp distal
Rr642384	regulatory region 642384	848 bp distal
Rr642385	regulatory region 642385	301 bp distal
Rr642386	regulatory region 642386	within coordinates
Tssr64479	transcription start site region 64479	983 bp downstream
Tssr64480	transcription start site region 64480	742 bp downstream
Tssr64481	transcription start site region 64481	533 bp downstream
Tssr64482	transcription start site region 64482	156 bp upstream
Zfp110	zinc finger protein 110	within coordinates