rs31391082 SNP Detail

Summary

• ID
  rs31391082
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:106890921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATGGAGCG TGGAATGGTT CCTGGCTAAC AGAAGCAGAA
  ATGTTAGGTA TGGTGAAGCA TGTGAGAGCT GTCAGAGGAA AGATCACCAT GTTCTGGAGG
  K
  TCTCATTCCC TCAACTCCCC ACTAGTACCC ATCACTACCA ACATTAGGGT CTGGTGAGTC
  CATGAGACCA AGACTCACCT TCATCAACTT ATTGGTGAC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45530617	mCV22905368	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	G
ss135580929	ENSMUSSNP151122	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31391082					SNP	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:106890921 () rs orientation: forward

Symbol	Name	Function Class
Rr582881	regulatory region 582881	1885 bp distal