rs31393251 SNP Detail

Summary

• ID
  rs31393251
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127399368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTG GGTGAAGCAG GAGAGAGGGG
  R
  AATGGGTGGC TTTGAGTTTG GGGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46027975	mCV25139152	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss145882786	ENSMUSSNP1296598	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss322451574	CHEV_7_134943710	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31393251					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127399368 () rs orientation: forward

Symbol	Name	Function Class
9430064I24Rik	RIKEN cDNA 9430064I24 gene	within coordinates
Cpgi19768	CpG island 19768	915 bp distal
Gm49388	predicted gene, 49388	within coordinates
Hsd3b7	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	462 bp upstream
Rr655897	regulatory region 655897	within coordinates
Rr655898	regulatory region 655898	308 bp proximal
Setd1a	SET domain containing 1A	74 bp downstream
Tssr69292	transcription start site region 69292	412 bp upstream
Tssr69293	transcription start site region 69293	427 bp upstream
Tssr69294	transcription start site region 69294	515 bp upstream
Tssr69295	transcription start site region 69295	648 bp upstream