rs31393713 SNP Detail

Summary

• ID
  rs31393713
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86181085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGATAAAAA CGGTTAAATG TACCTATATC ACTTTTGGGA
  AGTGTTGGCT TGTATAAATA TATACCTGTT CTTCATTTAT TGAGCTAAAA CACTCAAGTT
  Y
  TACATGCTTT GGTGGTTTTT ATGGCTAAAT TGTTTTTATA TGTCTACTAG TTGTAAATGT
  CATTTTGATT TCATTGCCAG TGTTGTTATT GTTTTTTAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45530256	mCV24142040	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss135445823	ENSMUSSNP5640321	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			T
ss320829509	CHEV_3_86077700	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31393713					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86181085 () rs orientation: forward

Symbol	Name	Function Class
Gm26343	predicted gene, 26343	1454 bp downstream
Lrba	LPS-responsive beige-like anchor	within coordinates