rs31396062 SNP Detail

Summary

• ID
  rs31396062
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:160831271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAGG CCCTGGGCTC AATCCCCAGC
  R
  CTATGGGGTA AAGGACAAAG AAATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45029479	mCV24549831	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145903623	ENSMUSSNP4864803	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31396062					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160831271 () rs orientation: forward

Symbol	Name	Function Class
Gm37072	predicted gene, 37072	1856 bp upstream
Rr13567	regulatory region 13567	1130 bp proximal
Rr20110	regulatory region 20110	930 bp proximal
Rr20111	regulatory region 20111	1930 bp proximal
Serpinc1	serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	1158 bp downstream
Tssr9670	transcription start site region 9670	1871 bp downstream
Zbtb37	zinc finger and BTB domain containing 37	within coordinates