rs31399965 SNP Detail

Summary

• ID
  rs31399965
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:7664081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTACA AAAGGTAAAA TAAAGTTTTC
  S
  GTTTAGTCAA GAGTCTCTAG GATAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39285706	mCV24310297	ABI	CRAMUS_MOUSE	f	SNP	C	G		G		C
ss51189938	NES14316970	PERLEGEN	MM_PANEL2	f	SNP		G	G		G	C	G	C	G	C	C	G
ss139100848	ENSMUSSNP754046	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31399965					SNP	C	G	G	G	G	C	G	C	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51189938	NES14316970	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:7664081 () rs orientation: forward

Symbol	Name	Function Class
Nek10	NIMA (never in mitosis gene a)- related kinase 10	within coordinates
Rr290587	regulatory region 290587	520 bp proximal
Tssr124320	transcription start site region 124320	1538 bp downstream