rs31400034 SNP Detail

Summary

• ID
  rs31400034
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:18781664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTTATAGGG AACCATGGGG ATTCTTTAGG TGATTGGGAG
  GAGTTAAAGT GGTCACATTA CTTTGCTTGA CTACAATGTT AGTTCTGCTA TATTTAGAGA
  S
  TGGGTTAGGT AACCTAAAAT TGCATTGGTG GGTGCTGGGG AGGTCACAGA GGTCAATTTC
  TGATTGGCTT GTGACAGGTG GTCAGTGGTC TGCATTCTT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45029195	mCV23904602	ABI	CRAMUS_MOUSE	f	SNP		C						G
ss60701763	NES16351160	PERLEGEN	MM_PANEL2	f	SNP	C	C	G	C	C	C	G	G	C	C	G	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31400034					SNP	C	C	G	C	C	C	G	G	C	C	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60701763	NES16351160	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:18781664 () rs orientation: forward

Symbol	Name	Function Class
Gm70695	predicted gene, 70695	921 bp downstream