rs31401357 SNP Detail

Summary

• ID
  rs31401357
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55168280 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGGCTGG GGAACAGGAA
  GCTGGAACAA TGGATCCCAG CCAGTGGGGC TGGATGCCAA AGAGGACTGG GATGCCCTGT
  GGTTTTAGGC AGGTGCAAAT GAAACACATC CAGTGCCAGT CCGGGGGGGG GGGGGAGCAC
  TGGAGCAAGG GTGGGAGCAC TGAGGCAAGG ATGGGTATGG CACTGGCTGA AGATATTAAT
  R
  GCCTTATTAT TCTTCCCAGG GGAACAGGAA CACATTTTCT CTGGGGGCTC TCCTTCCATT
  CATAGCCACC TGAGGATTGG CTCATGCTAG AAGCTTATGT TTGGAGTTAC TGAGGGCTGG
  AATGGAAAAG CCAGCTCAGG TTTTTTTTTT CTAACTACCT AACCCTGAGT AGATGATTGG
  GGTTGGGTCT CACTTTCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39285733	mCV23146519	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss139573280	ENSMUSSNP4448088	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss324640916	CHEV_14_55549660	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31401357					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55168280 () rs orientation: forward

Symbol	Name	Function Class
Il25	interleukin 25	1872 bp upstream
Rr389680	regulatory region 389680	within coordinates
Rr492369	regulatory region 492369	61 bp distal