rs31403092 SNP Detail

Summary

• ID
  rs31403092
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:106094947 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACACAGCAT GAAAAAATAC
  ATGAATATAT ATTTCAGTTA AACTACTTAT AAGGGGCTGG CTAATCCTCA GGACTCAAAT
  AATAGAAGGA GTGAACTGAC TCCTATAAAT TGTCCTCTGA CCTCCACACA CTTTTCATTT
  CACACAGGTG TCCACACATA TATAACATGC ATGCTCGCGT GCGCGCGCGC GCGCGCGCGC
  R
  CACACACACA CACACACACA CTAAACAAAC AAACAAACAA ACAAACATAA TATGATTGTT
  GTAACTTTAA GGCCAAACAT AGTGAGTTCC ACACCCTGCC TGTCTCAAAA CAAACCAAAA
  CCCTGTAGCT GAATAATGGT GCTTTAATTC CCAATAAATT TAGAAATTAG ATTTCAAATT
  AAAAAAATAG AGATAACAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39286484	mCV24683290	ABI	CRAMUS_MOUSE	f	SNP		G	G	A
ss146767830	ENSMUSSNP5347021	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31403092					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:106094947 () rs orientation: forward

Symbol	Name	Function Class
Gm48970	predicted gene, 48970	within coordinates
Gm63380	predicted gene, 63380	124 bp downstream
Rr294089	regulatory region 294089	1362 bp proximal
Rr390111	regulatory region 390111	703 bp upstream
Tssr130160	transcription start site region 130160	1667 bp downstream