rs31404915 SNP Detail

Summary

• ID
  rs31404915
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127312937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGATCAGAC AGATTCACAC
  GGATAAAAGA AGCTACTTTG GAAGTATGAA CAAATTCCCT AAAGTGGAAG GAAGAAATTG
  ATTTGAGAAT AGGGAGAACT TGGAGGCAGC ACTAAGAAGG AGGTATTTGA ATTTGGTCCT
  AGTAGTATTT CAATAGTGAC CTGAGGACAG GAGAGACATC TATGTAGAGA AACTGCTTGG
  Y
  GGAGATCTGG TGCCTGGGAT GGGGCAGATT CTTCGTAGGT TGAATATTAG CATCCAGAGC
  AGAGACTCTG GGTTCAGGGA GAGCCAGCTT GGGAAAGATG GTTAAGGAGT GGGGTTTGGT
  TGCCTTTATA ACCTCTCACT TCCTTCTCTT TCCCACCAGA AGACCACCAG ACTGACTCCT
  CAATCTCATT CCTACCCCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46028547	mCV24290443	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs31404915					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127312937 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19761	CpG island 19761	493 bp distal
Ctf1	cardiotrophin 1	within coordinates
Rr655879	regulatory region 655879	811 bp distal
Rr655880	regulatory region 655880	171 bp distal
Tssr69270	transcription start site region 69270	1020 bp downstream