rs31408674 SNP Detail

Summary

• ID
  rs31408674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72378153 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCAATGCAA ACCAGGATTT TCGTTGTTTC CAAGGGTTTG
  CATTGGAATA CCCCATGTCT ACTTCAGCCA GATAACTCAT GCTTGGACCT GCTTTATCCT
  R
  GGGCTTCCCT CCCCTCTGTG AGCACTTCTT AACTTTCTGC ACATAAGGCT GACCCATCGG
  GCATTTGCTT CTCAGTGTGT TCACCCATGA GAAGCAAAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss39381529	mCV23951438	ABI	CRAMUS_MOUSE	f	SNP		G	G				G	A
ss48048877	NES12090228	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G		A	G	G	G	G
ss148101118	ENSMUSSNP6802210	ENSEMBL	ENSEMBL_Sanger	f	SNP			G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31408674					SNP	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48048877	NES12090228	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72378153 () rs orientation: forward

Symbol	Name	Function Class
A930009L07Rik	RIKEN cDNA A930009L07 gene	685 bp downstream
Kcnk9	potassium channel, subfamily K, member 9	within coordinates