rs31410556 SNP Detail

Summary

• ID
  rs31410556
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72381155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATCTCAGT CTCCTCCTCT GAAAATGAAG GAGCCAGTGG
  AGCTGCCCCT GCTTGGAGCC CCTTCAACTC TACTGGTGGA CTCTTCATAG AAATGGCCTA
  Y
  TCCCATATGG TAAAATGGAG AGTCCTTCAG AATTTGACTC CTCCCTGCTC TCACCCCAAG
  AGAGCACATC AGTGGATGTG CCCAGAGAAC AATATCACC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39359838	mCV23952452	ABI	CRAMUS_MOUSE	f	SNP	C	C	C						T
ss48048899	NES12090077	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C	C	T	C	C	C		C	C	C	C
ss148101133	ENSMUSSNP4555967	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31410556					SNP	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48048899	NES12090077	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72381155 () rs orientation: forward

Symbol	Name	Function Class
A930009L07Rik	RIKEN cDNA A930009L07 gene	48 bp upstream
Kcnk9	potassium channel, subfamily K, member 9	within coordinates