rs31414181 SNP Detail

Summary

• ID
  rs31414181
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72539317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAAGGAAG CTGTGAGCCA
  GATCTGGGTG TGTGGCTTCT AGCCTCATGG GACCCTGACA TGCAGAAAGA ATTGAGGGGG
  ACGGAAAGTG CAAAGCCAGG GATTGGCAGG ACACAGGAAG ATGGGAAGGA AGAGCCAACC
  CTGTCTTGGG TTCAAAGGAA AGATGGAACA CCTACCTCCC AGAGGAGTGG TTGGAGATGA
  Y
  AGGACTACAT TAGACCTCTC CCGGGACAAT GTGTGTCCTG CACCAGTGAG CAGGGCCCTG
  GGATCCCAGG AACCTGGACT TGAGACTGGT GAATGGTTTC TGGCCCCTTA CCCAGACCAT
  ACCCAAGGGT ACGACTGTCT CTCCTGGATG ATACTCACTC TGAATCGCTG TCTTATAAGA
  CTTCGAGTAG CAAAACAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss48049853	NES12098841	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs31414181					SNP	C	C	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48049853	NES12098841	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72539317 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7154	CpG island 7154	1025 bp proximal
Trappc9	trafficking protein particle complex 9	within coordinates