rs31415807 SNP Detail

Summary

• ID
  rs31415807
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72542047 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTGGCTG ACCCAATCAC
  TTACTGGTTT GCAAGGGCAC ACTACCATCT ACACTTTCAC TAGTCACGGC ATGGTGACTC
  TTTTGACTCT GTTTACCCAA CTGTCCATCT ATCTGCTCAG CTGTACATCA GTCCAGCCAG
  CCGGCTGGAC AGCTATGGAC TCTCTCTTCC CACCTATCTT TCTTATGAAG GCTTCATCCC
  W
  TGCCCAGAGC CATCCCACAA AACTGAGTTT GAAAGAGATC ATGCTGGGAG ACAATTCACA
  GCTCTCTGCC CACAGGCCTC CATGAGGGAC TTCCAGGGAA AATCGTGGTA GAGAAAATGC
  AAAACGCCCA TGGACTTAGC CCCAGCTAGC TGGTGATACT CTGGACACTT GTCTGGTGCC
  TCCCCAGAGC CTGGTCTCTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss48049869	NES12098733	PERLEGEN	MM_PANEL2	f	SNP	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs31415807					SNP	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48049869	NES12098733	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72542047 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7154	CpG island 7154	1440 bp distal
Trappc9	trafficking protein particle complex 9	within coordinates