rs31415813 SNP Detail

Summary

• ID
  rs31415813
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72542302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACAGCTC TCTGCCCACA
  GGCCTCCATG AGGGACTTCC AGGGAAAATC GTGGTAGAGA AAATGCAAAA CGCCCATGGA
  CTTAGCCCCA GCTAGCTGGT GATACTCTGG ACACTTGTCT GGTGCCTCCC CAGAGCCTGG
  TCTCTTGGAT CGTAGAGGAA CTTGTACGGG AATGGGATCA ATTCTGATGA GAGATGTGAC
  Y
  GGAACCCTGT GTGCGCAGAA GCATGCCATG GCCAGGGAAC CCCACACGGC GGCATCTGAA
  CTTGACCTTA CTCAAACTGA AACAACTGCA TCTCCCTGAC TCCTCCTCTT CTCACATAAA
  CGGGTCTGCT TTCAGCAGGA ACTCAGGAGA TCAGGGAGCC CACAGATGCC CCTGCCCCTG
  CTCCAGACAC CATGTAAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss48049875	NES12098737	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs31415813					SNP	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48049875	NES12098737	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72542302 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7154	CpG island 7154	1695 bp distal
Trappc9	trafficking protein particle complex 9	within coordinates