rs31416318 SNP Detail

Summary

• ID
  rs31416318
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181975356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACCCAAA GAATCATGAA
  AAGGCCTTGA TGTAATTACA CGAGGTCGTT TAATGACGGA GCTCCGGACC GACATGCATC
  CCACACAGGA GATAACGGAT GTCGGCCACG AGGCTCGAAA GCTAGGGGGT TTTATGGGGT
  AAGGGGTTTA GGGGTGTGGA ATTCAGCATA GCGACACACT ACTGCCTTAT TCAAACATCA
  R
  CAGAAAAATT ACATGTACGT GCAGGGTGTC AGAGTTCTGT GAGTTGTTGT CTCAGTTCAG
  ATAGCCCTGT TATGTCCTCA CATTCCTCTT TATCTTTAAG GTTAAGCTGT TCCCAGGAAT
  GTTTTAACTA CGGGGCATAC CCGGGTTTGT TTTTCTTTTT TCTCAGTCCC AGGCAGCCTC
  TAGGCTCACA AACAACCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45030591	mCV24015068	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31416318					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181975356 () rs orientation: forward

Symbol	Name	Function Class
Rr424879	regulatory region 424879	1857 bp distal
Rr424881	regulatory region 424881	1146 bp proximal
Rr424882	regulatory region 424882	1596 bp proximal