rs31421783 SNP Detail

Summary

• ID
  rs31421783
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61314238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTATGTCCTG AGATAGTCTT GCCAAGATCC CAGTGTTTTC
  ACTCTCTCAG AATATCACAC TGAAGGCTCC AATTTGCCAT CAAACAAGAA AGGGGAGGGT
  S
  ATGCACTTCT CTTTTGCCCT CAGTACAATG CTGTCTAGTT CCCTTAAGGT AACGGATGCA
  TGTGCATTTT GCAGTTTATA TTCCATTGGA GATTGTTGT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45531808	mCV24499490	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	C
ss135224483	ENSMUSSNP539075	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31421783					SNP	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61314238 () rs orientation: forward

Symbol	Name	Function Class
Gm40061	predicted gene, 40061	within coordinates
Rr72571	regulatory region 72571	362 bp proximal
Rr81199	regulatory region 81199	1764 bp proximal