rs31424410 SNP Detail

Summary

• ID
  rs31424410
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:106431279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGAAGCTGC TGACCCCTGT GGTTGAATTA GGGAAAAGCT
  GGTAGAAGCT GAGGAGGAGG GCAACCCTAT AGAAGGACCA GCAGTCTCAA TTAACCTGGA
  M
  CAATGAGATC TCTCAGACAC TGGATCACTA ACCAGGCAGC ATACACCAGC TGATATGAGG
  CCCCCAACAC ATACATATAC AGCAGAGGAC TTCTGGGTC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45532219	mCV23490620	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss320863766	CHEV_3_106326881	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs31424410					SNP	A	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:106431279 () rs orientation: forward

Symbol	Name	Function Class
Cept1	choline/ethanolaminephosphotransferase 1	within coordinates
Tssr34972	transcription start site region 34972	1491 bp downstream